Serveur d'exploration Cyberinfrastructure

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Provirophages in the Bigelowiella genome bear testimony to past encounters with giant viruses

Identifieur interne : 000080 ( Main/Exploration ); précédent : 000079; suivant : 000081

Provirophages in the Bigelowiella genome bear testimony to past encounters with giant viruses

Auteurs : Guillaume Blanc [France] ; Lucie Gallot-Lavallée [France] ; Florian Maumus [France]

Source :

RBID : PMC:4586850

Abstract

Significance

Virophages are viruses that hijack the replication machinery of giant viruses for their own replication. Virophages negatively impact giant virus replication and improve the survival chances of eukaryotic cells infected by giant viruses. In this study, we identified segments of the Bigelowiella natans genome that originate from virophages and giant viruses, revealing genomic footprints of battles between these viral entities that occurred in this unicellular alga. Interestingly, genes of virophage origin are transcribed, suggesting that they are functional. We hypothesize that virophage integration may be beneficial to both the virophage and B. natans by increasing the chances for the virophage to coinfect the cell with a giant virus prey and by defending the host cell against fatal giant virus infections.


Url:
DOI: 10.1073/pnas.1506469112
PubMed: 26305943
PubMed Central: 4586850


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Provirophages in the Bigelowiella genome bear testimony to past encounters with giant viruses</title>
<author>
<name sortKey="Blanc, Guillaume" sort="Blanc, Guillaume" uniqKey="Blanc G" first="Guillaume" last="Blanc">Guillaume Blanc</name>
<affiliation wicri:level="1">
<nlm:aff id="aff1">Laboratoire Information Génomique et Structurale, UMR7256 (Institut de Microbiologie de la Méditerranée FR3479) CNRS,
<institution>Aix-Marseille Université</institution>
, 13288 Marseille cedex 9,
<country>France</country>
;</nlm:aff>
<country xml:lang="fr">France</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Gallot Lavallee, Lucie" sort="Gallot Lavallee, Lucie" uniqKey="Gallot Lavallee L" first="Lucie" last="Gallot-Lavallée">Lucie Gallot-Lavallée</name>
<affiliation wicri:level="1">
<nlm:aff id="aff1">Laboratoire Information Génomique et Structurale, UMR7256 (Institut de Microbiologie de la Méditerranée FR3479) CNRS,
<institution>Aix-Marseille Université</institution>
, 13288 Marseille cedex 9,
<country>France</country>
;</nlm:aff>
<country xml:lang="fr">France</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Maumus, Florian" sort="Maumus, Florian" uniqKey="Maumus F" first="Florian" last="Maumus">Florian Maumus</name>
<affiliation wicri:level="1">
<nlm:aff id="aff2">INRA, UR1164 Unité de Recherche Génomique-Info,
<institution>Institut National de la Recherche Agronomique de Versailles-Grignon</institution>
, 78026 Versailles,
<country>France</country>
</nlm:aff>
<country xml:lang="fr">France</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PMC</idno>
<idno type="pmid">26305943</idno>
<idno type="pmc">4586850</idno>
<idno type="url">http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4586850</idno>
<idno type="RBID">PMC:4586850</idno>
<idno type="doi">10.1073/pnas.1506469112</idno>
<date when="2015">2015</date>
<idno type="wicri:Area/Pmc/Corpus">000047</idno>
<idno type="wicri:Area/Pmc/Curation">000047</idno>
<idno type="wicri:Area/Pmc/Checkpoint">000074</idno>
<idno type="wicri:Area/Ncbi/Merge">000662</idno>
<idno type="wicri:Area/Ncbi/Curation">000662</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">000662</idno>
<idno type="wicri:doubleKey">0027-8424:2015:Blanc G:provirophages:in:the</idno>
<idno type="wicri:Area/Main/Merge">000080</idno>
<idno type="wicri:Area/Main/Curation">000080</idno>
<idno type="wicri:Area/Main/Exploration">000080</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en" level="a" type="main">Provirophages in the Bigelowiella genome bear testimony to past encounters with giant viruses</title>
<author>
<name sortKey="Blanc, Guillaume" sort="Blanc, Guillaume" uniqKey="Blanc G" first="Guillaume" last="Blanc">Guillaume Blanc</name>
<affiliation wicri:level="1">
<nlm:aff id="aff1">Laboratoire Information Génomique et Structurale, UMR7256 (Institut de Microbiologie de la Méditerranée FR3479) CNRS,
<institution>Aix-Marseille Université</institution>
, 13288 Marseille cedex 9,
<country>France</country>
;</nlm:aff>
<country xml:lang="fr">France</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Gallot Lavallee, Lucie" sort="Gallot Lavallee, Lucie" uniqKey="Gallot Lavallee L" first="Lucie" last="Gallot-Lavallée">Lucie Gallot-Lavallée</name>
<affiliation wicri:level="1">
<nlm:aff id="aff1">Laboratoire Information Génomique et Structurale, UMR7256 (Institut de Microbiologie de la Méditerranée FR3479) CNRS,
<institution>Aix-Marseille Université</institution>
, 13288 Marseille cedex 9,
<country>France</country>
;</nlm:aff>
<country xml:lang="fr">France</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
<author>
<name sortKey="Maumus, Florian" sort="Maumus, Florian" uniqKey="Maumus F" first="Florian" last="Maumus">Florian Maumus</name>
<affiliation wicri:level="1">
<nlm:aff id="aff2">INRA, UR1164 Unité de Recherche Génomique-Info,
<institution>Institut National de la Recherche Agronomique de Versailles-Grignon</institution>
, 78026 Versailles,
<country>France</country>
</nlm:aff>
<country xml:lang="fr">France</country>
<wicri:regionArea># see nlm:aff country strict</wicri:regionArea>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Proceedings of the National Academy of Sciences of the United States of America</title>
<idno type="ISSN">0027-8424</idno>
<idno type="eISSN">1091-6490</idno>
<imprint>
<date when="2015">2015</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">
<title>Significance</title>
<p>Virophages are viruses that hijack the replication machinery of giant viruses for their own replication. Virophages negatively impact giant virus replication and improve the survival chances of eukaryotic cells infected by giant viruses. In this study, we identified segments of the
<italic>Bigelowiella natans</italic>
genome that originate from virophages and giant viruses, revealing genomic footprints of battles between these viral entities that occurred in this unicellular alga. Interestingly, genes of virophage origin are transcribed, suggesting that they are functional. We hypothesize that virophage integration may be beneficial to both the virophage and
<italic>B. natans</italic>
by increasing the chances for the virophage to coinfect the cell with a giant virus prey and by defending the host cell against fatal giant virus infections.</p>
</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>France</li>
</country>
</list>
<tree>
<country name="France">
<noRegion>
<name sortKey="Blanc, Guillaume" sort="Blanc, Guillaume" uniqKey="Blanc G" first="Guillaume" last="Blanc">Guillaume Blanc</name>
</noRegion>
<name sortKey="Gallot Lavallee, Lucie" sort="Gallot Lavallee, Lucie" uniqKey="Gallot Lavallee L" first="Lucie" last="Gallot-Lavallée">Lucie Gallot-Lavallée</name>
<name sortKey="Maumus, Florian" sort="Maumus, Florian" uniqKey="Maumus F" first="Florian" last="Maumus">Florian Maumus</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Ticri/CIDE/explor/CyberinfraV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000080 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000080 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Ticri/CIDE
   |area=    CyberinfraV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     PMC:4586850
   |texte=   Provirophages in the Bigelowiella genome bear testimony to past encounters with giant viruses
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:26305943" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a CyberinfraV1 

Wicri

This area was generated with Dilib version V0.6.25.
Data generation: Thu Oct 27 09:30:58 2016. Site generation: Sun Mar 10 23:08:40 2024